Title | The eLearning course for Food Microbial Bioinformatician - Module 2: Bioinformatics pathway (FREE) |
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Type | Fad e-learning (FAD) |
Provider | IZS dell'Abruzzo e del Molise "G. Caporale" |
Edition | 1 |
ECM event | No |
Municipality / foreign state of development | - |
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Place of delivery | - |
Starting date | 29/03/2021 |
Ending date | 15/12/2021 |
Participation fee | - |
This module provides with an introduction to programming languages and to WGS data, deals with the various phases of the Dry Lab, as WGS data and comparative analysis, and related bioinformatic tools. Units: 2.1 Priming on Linux 2.2 WGS data 2.3 Data analysis 2.4 Visualization tools Duration: 300 hours
Learning objectives |
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Surname and Name | Qualifications | Job Profile |
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Pomilio Francesco | Reparto di Igiene degli alimenti e dell’alimentazione animale | Veterinario Dirigente Responsabile |
Surname and Name | Role | Job Profile | Discipline (or qualification) | Substitute |
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Di Pasquale Adriano | Docente / Esperto di contenuto FAD e-learning | Altre professioni | Not specified | N/A |
Mangone Iolanda | Docente / Esperto di contenuto FAD e-learning | Biologo | Biologo | N/A |
Rinaldi Antonio | Docente / Esperto di contenuto FAD e-learning | Altre professioni | Not specified | N/A |
chiaverini alexandra | Docente / Esperto di contenuto FAD e-learning | Veterinario | Igiene, prod, trasf, commercializ conserv e trasporto alimenti di origine animale e derivati | N/A |
Radomski Nicolas | Docente / Esperto di contenuto FAD e-learning | Altre professioni | Not specified | N/A |
DI MARCANTONIO LISA | Docente / Esperto di contenuto FAD e-learning | Biologo | Biologo | N/A |
Garofolo Giuliano | Docente / Esperto di contenuto FAD e-learning | Veterinario | Sanità animale | N/A |
Torresi Marina | Docente / Esperto di contenuto FAD e-learning | Biologo | Biologo | N/A |
KRASTEVA IVANKA MARINOVA | Docente / Esperto di contenuto FAD e-learning | Altre professioni | Not specified | N/A |
LUCIANI MIRELLA | Docente / Esperto di contenuto FAD e-learning | Biologo | Biologo | N/A |
Unit |
Contents |
Unit 2.1 |
Priming on Linux |
Learning objectives |
At the end of the unit, the student will know:
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Topics |
Index Intro Introduction to Linux information system Introduction to Shell Text files management Installing software Working on remote computers Programming with Unix and Python |
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Database management system. Basic concepts In depth contents Summary Test |
Unit 2.2 |
WGS data |
Learning objectives |
At the end of the unit, the student will know:
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Topics |
Index Intro Data format Data storage Access to public databases In depth contents Summary Test |
Unit 2.3 |
Data analysis |
Learning objectives |
At the end of the unit, the student will know principles and tools:
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Topics |
Index Intro WGS Data analysis Comparative analysis Metagenomics Data analysis Transcriptomics data analysis Proteomics data analysis In depth contents Summary Test |
Unit 2.4 |
Visualization tools |
Learning objectives |
At the end of the unit, the student will be able to use several programs for visualisation of analysis outputs |
Topics |
Index Intro Several programs for visualization of analysis outputs In depth contents Summary Test |
Language | English |
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Simultaneous translation | No |
Learning materials | Nessuno |
Learning assessment procedures | Questionario con quesiti a scelta quadrupla con singola risposta esatta |
Total training length (hh:mm) | 300:00 |
Minimum attendance | 1% |